Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841137.1_cds_XP_016507863.1_20942
CDS Infomation

[gene=LOC107825517] [db_xref=GeneID:107825517] [protein=transcription factor bHLH3-like] [protein_id=XP_016507863.1] [location=18725..20149] [gbkey=CDS]
Sequence

ATGGGGGAGAAACTTTTTATGAAGGAAGAGGAAAGGGTTATTATGGAGGGAGTATTGGGA
AGAGAAGCAGTAGAATTTTTCACCTGGTCAGCTTCCAATAGCATGCTCATGGAATTTACT
TCGTCGAGAGGGGATTTGGGCGTGCAGCAATCGCTTTGCAAGATTGTCGAGGGGTCTGAT
TGGACTTACGCAATCTATTGGCAAGTTGCAAAGTCGAAATCGGGGAAATCAGCTTTGATA
TGGGGTGATGGACATTGCCGAGAAGCAAAGATGGGACAAAGTGAAGGCGGGAATGATTCC
GAGCATCAGAAAATGATGGATGGAAACAAGAAAAAACTTGTTCTTCAAAAGATTCACACT
TGCTTTGGAGGGTCAGCAGATGATAATATTGCTGCCAAGTTGGATTCTGTCTCGGACGTG
GAGGTGTTTTATCTCACGTCAATGTATTATATCTTCCCTTTTGAGAAGCCTTCTAGTCCT
TCTCAATCATTTAATTCTGCTAGATCAATATGGGTTTCCGATGTAAGAGGTTGCTTAGAA
CATTTCCAATCAAGATCTTATCTAGCAAAGTTGGCTCGATTTGAGACACTAGTATTTATT
CCGCTGAAATCAGGGGTCGTGGAGCTTGGTTCTCTAAAGTCAATTCCAGAAGATCAGAAT
TTGATTCAGACGGTGAAAACATCGGTGGTGGTATCTAATCCTCCACAACCTAAAGCAATT
CCAAAGATATTTGGGCGGGAACTCAGTCTCGGTGGTTCTAAGTCGGGTCCCATCAGCATA
AATTTTTCTCCGAAGGTGGAAGAAGATCTGAGTTTTGCTACAGATGCTTACGAAGTACAA
GCAGCGCTAGGTAGTTCTCAAGTTTATGGAAACTCATCGAATGGGTATCGAAGCGATGAA
GGTGAAGGGAAACTTGAATTAGATGAACGGAAGCCAAGAAAAAGAGGCAGAAAGCCGGCC
AATGGGAGAGAAGAAGCATTGAATCATGTTGAAGCAGAGAGGCAGAGGCGCGAGAAGCTT
AACCAGAGGTTTTACGCTTTAAGAGCAGTTGTTCCAAATATCTCAAAGATGGATAAAGCA
TCGCTGCTTGGAGATGCAATTGCATATATCACAGATCTTCAGGCTAAAATTAGGGTTTTA
GATGCTGAGAAGGAGATGGTAAACGACCAGCAAAAACAGCAGGCTCCCCTGGAAATTGAT
TTTCATCAAAGACAAGATGATGCAGTTGTAAGAGTAGGCTGCCCTTTGAATGCTCACCCT
GTTTCTAGAGTTCTGAAGACATTTCAAGAACATCAAATAGTGGCACAAGAATCCAATGTC
TCATTAACAGAAAACAGTGAAATCGTCCACACATTCTCTATACGAGCTCCTGGTGGTGCT
GCTGAGAATTTGAAGGAAAAGCTCACAGCTGCTCTATCCAAATGA

Peptide Sequence

PEP ID

XP_016507863.1
PEP Infomation

PREDICTED: transcription factor bHLH3-like [Nicotiana tabacum]
Sequence

MGEKLFMKEEERVIMEGVLGREAVEFFTWSASNSMLMEFTSSRGDLGVQQSLCKIVEGSD
WTYAIYWQVAKSKSGKSALIWGDGHCREAKMGQSEGGNDSEHQKMMDGNKKKLVLQKIHT
CFGGSADDNIAAKLDSVSDVEVFYLTSMYYIFPFEKPSSPSQSFNSARSIWVSDVRGCLE
HFQSRSYLAKLARFETLVFIPLKSGVVELGSLKSIPEDQNLIQTVKTSVVVSNPPQPKAI
PKIFGRELSLGGSKSGPISINFSPKVEEDLSFATDAYEVQAALGSSQVYGNSSNGYRSDE
GEGKLELDERKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKA
SLLGDAIAYITDLQAKIRVLDAEKEMVNDQQKQQAPLEIDFHQRQDDAVVRVGCPLNAHP
VSRVLKTFQEHQIVAQESNVSLTENSEIVHTFSIRAPGGAAENLKEKLTAALSK

Transcript Sequence

Gene sequence data has not been registered.